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Higher Layer Registry

Layers 2–9 · planned capability inventories at 0% · implementation deferred
Atoms Molecules Crystals Primes Engines Factories Systems Meta-systems
Atoms
Normalized primitive operations built on proven runtime substrate capabilities
10 planned 0 proven blocked by Runtime Substrate proofing
PROVEN
AtomDescriptionDepends OnFillStatus
ReadFileRead file content with offset/limit paramsRS-001, RS-0030%
PROVEN
WriteFileWrite/overwrite file with directory creationRS-002, RS-003100%
PROVEN
RunCommandExecute shell command with timeoutRS-005100%
PROVEN
CaptureStdoutCapture stdout + stderr + exit code as structured resultRS-006, RS-007, RS-008100%
PROVEN
CaptureGitDiffCapture git diff for working tree changesRS-009, RS-010100%
PROVEN
CallModelInvoke model with prompt, capture structured responseRS-015100%
PROVEN
AppendLedgerAppend structured entry to append-only ledgerRS-013100%
PROVEN
ValidateJSONParse + validate JSON against schemaRS-011, RS-012100%
PROVEN
SaveArtifactSave artifact with metadata and proof linkRS-004100%
PROVEN
GuardForbiddenPathValidate path against forbidden paths, return allow/denyRS-018100%
PROVEN
Molecules
Small reusable routines composed from atoms
8 planned 0 proven blocked by Atoms
FROZEN
MoleculeDescriptionDepends OnFillStatus
RunFolderInitInitialize project folder with directory structureA-ReadFile, A-WriteFile0%FROZEN
PromptDispatchRoute prompt to model with template + context injectionA-CallModel0%FROZEN
ArtifactSaveSave structured artifact with automatic namingA-SaveArtifact0%FROZEN
JSONValidateValidate JSON file against embedded schemaA-ValidateJSON0%FROZEN
LedgerAppendAppend entry with timestamp + source + proof refA-AppendLedger0%FROZEN
DiffCaptureCapture diff with automatic file filteringA-CaptureGitDiff0%FROZEN
OutputNormalizeNormalize stdout/stderr into structured result objectA-CaptureStdout0%FROZEN
ReviewPacketBuildAssemble proof packet from operation resultsA-CallModel, RS-0190%FROZEN
Crystals
Callable capability functions with four faces: Intake → Operation → Proof/Review → Handoff
6 planned 0 proven blocked by Molecules
FROZEN
CrystalDescriptionDepends OnFillStatus
TaskIntakeReceive task, validate payload, create intake recordM-JSONValidate, M-LedgerAppend0%FROZEN
BuilderDispatchDispatch task to builder with context + guardrailsM-PromptDispatch, M-ArtifactSave0%FROZEN
ReviewerDispatchDispatch review pass with diff + proof contextM-DiffCapture, M-PromptDispatch0%FROZEN
EvidencePacketBuildBuild evidence packet with output, diff, log, validationM-ReviewPacketBuild, M-OutputNormalize0%FROZEN
DecisionGateGate pass/fail on review result, route to handoff or retryC-TaskIntake, C-ReviewerDispatch0%FROZEN
FinalPacketBuildAssemble final proof packet with full evidence chainC-EvidencePacketBuild, M-LedgerAppend0%FROZEN
Primes
Reusable execution modules composed from crystals
6 planned 0 proven blocked by Crystals
FROZEN
PrimeDescriptionDepends OnFillStatus
Execution PrimeEnd-to-end task execution with intake → build → review → handoffC-TaskIntake, C-BuilderDispatch, C-DecisionGate0%FROZEN
Reviewer PrimeFull review pass with evidence verificationC-ReviewerDispatch, C-EvidencePacketBuild0%FROZEN
Diagnostic PrimeSystem diagnostic with health check and error analysisA-CaptureStdout, M-OutputNormalize0%FROZEN
Evidence PrimeFull evidence chain builder for capability verificationC-EvidencePacketBuild, C-FinalPacketBuild0%FROZEN
Research PrimeMulti-source research with synthesis and citationM-PromptDispatch, M-ArtifactSave0%FROZEN
Composition PrimeCompose primitives into higher-order workflowsP-Execution, P-Reviewer0%FROZEN
Engines
Domain engines composed from primes
5 planned 0 proven blocked by Primes
FROZEN
EngineDescriptionDepends OnFillStatus
Page Builder EngineBuild production-ready HTML/CSS pages from specP-Execution, P-Reviewer0%FROZEN
Proposal EngineGenerate structured proposals with research + citationsP-Research, P-Evidence0%FROZEN
Outreach EnginePersonalized outreach with recipient research + template compositionP-Research, P-Composition0%FROZEN
Research EngineDeep domain research with multi-source synthesisP-Research, P-Diagnostic0%FROZEN
Visual EngineGenerate diagrams, dashboards, and visual artifactsP-Execution, M-ArtifactSave0%FROZEN
Factories
Compilations of multiple engines
4 planned 0 proven blocked by Engines
FROZEN
FactoryDescriptionDepends OnFillStatus
Website FactoryEnd-to-end website: spec → pages → review → deployE-PageBuilder, P-Reviewer0%FROZEN
Proposal FactoryProposal pipeline: research → draft → review → finalE-Proposal, E-Outreach0%FROZEN
Visual FoundryVisual asset generation: diagrams → dashboards → exportE-Visual, E-PageBuilder0%FROZEN
Lead RefineryLead pipeline: research → outreach → followup → trackE-Outreach, E-Research0%FROZEN
Systems
Applied operational products built from factories
— planned 0 proven blocked by Factories
FROZEN
Placeholder — no entries defined. Systems emerge from factory compilations.
Meta-systems
Systems that govern, build, coordinate, or evolve other systems
— planned 0 proven blocked by Systems
FROZEN
Placeholder — no entries defined. Meta-systems are the final recursion layer.